STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000004286annotation not available (356 aa)    
Predicted Functional Partners:
RPA2
Replication protein A2.
    
 0.826
B2M
Beta-2-microglobulin.
    
 0.826
SASS6
SAS-6 centriolar assembly protein.
    
 0.580
STN1
STN1 subunit of CST complex.
    
 0.580
ENSCABP00000000419
annotation not available
     
 0.568
ENSCABP00000014750
annotation not available
    
  0.553
KPNB1
Karyopherin subunit beta 1.
    
   0.530
CD3E
CD3e molecule.
   
 
 0.498
ENSCABP00000001834
annotation not available
   
 0.464
ENSCABP00000008041
annotation not available
   
 0.464
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.