STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPOR1RHO family interacting cell polarization regulator 1. (919 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.964
ENSCABP00000003025
annotation not available
    
 0.745
FREM1
FRAS1 related extracellular matrix 1.
    
 0.738
GLE1
GLE1 RNA export mediator.
    
 0.651
RPS11
Ribosomal protein S11.
   
 0.627
RPS12
Ribosomal protein S12.
   
  0.622
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.621
RPS2
Ribosomal protein S2.
   
  0.614
RPSA
Ribosomal protein SA.
    
  0.606
RPS15A
Ribosomal protein S15a.
   
 0.605
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.