STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000004446annotation not available (208 aa)    
Predicted Functional Partners:
KXD1
KxDL motif containing 1.
   
 0.969
ENSCABP00000006477
annotation not available
   
 0.957
BORCS5
BLOC-1 related complex subunit 5.
    
 0.940
ENSCABP00000020894
annotation not available
    
 0.936
ENSCABP00000009521
annotation not available
    
 0.935
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 0.932
CREBL2
cAMP responsive element binding protein like 2.
    
 0.876
SWI5
SWI5 homologous recombination repair protein.
    
 0.875
ENSCABP00000003852
annotation not available
   
 0.874
SNAPIN
SNAP associated protein.
   
 0.874
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.