STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000004750annotation not available (126 aa)    
Predicted Functional Partners:
XRN1
5'-3' exoribonuclease 1.
    
 0.980
DCP2
Decapping mRNA 2.
    
 0.980
EDC3
Enhancer of mRNA decapping 3.
    
 0.980
DDX6
DEAD-box helicase 6.
   
 0.967
EDC4
Enhancer of mRNA decapping 4.
    
 0.964
ENSCABP00000023330
annotation not available
  
 
0.958
ENSCABP00000005619
annotation not available
    
 0.921
NAXE
NAD(P)HX epimerase.
    
 0.921
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.920
PNRC2
Proline rich nuclear receptor coactivator 2.
    
 0.920
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.