STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000005055annotation not available (125 aa)    
Predicted Functional Partners:
ENSCABP00000005060
annotation not available
 
      0.900
ENSCABP00000024426
annotation not available
    
  0.858
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 
 0.789
ENSCABP00000016252
annotation not available
    
 0.732
PLEKHA2
Pleckstrin homology domain containing A2.
    
  0.698
APC2
APC regulator of WNT signaling pathway 2.
    
 
 0.648
ENSCABP00000015071
annotation not available
    
 
 0.648
RND2
Rho family GTPase 2.
    
  0.646
GAB1
GRB2 associated binding protein 1.
    
 0.644
PLEKHA1
Pleckstrin homology domain containing A1.
    
  0.621
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.