STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDC4Enhancer of mRNA decapping 4. (1400 aa)    
Predicted Functional Partners:
DCP2
Decapping mRNA 2.
    
 0.998
DDX6
DEAD-box helicase 6.
    
 0.992
EDC3
Enhancer of mRNA decapping 3.
   
 0.987
ENSCABP00000023330
annotation not available
    
 0.986
ENSCABP00000004748
annotation not available
    
 0.964
ENSCABP00000004750
annotation not available
    
 0.964
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.960
PATL2
PAT1 homolog 2.
    
 0.960
XRN1
5'-3' exoribonuclease 1.
    
 
 0.930
ENSCABP00000005619
annotation not available
   
 0.872
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.