STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFB4BPI fold containing family B member 4. (485 aa)    
Predicted Functional Partners:
APOE
Apolipoprotein E.
   
 0.684
APOA2
Apolipoprotein A2.
    
 0.661
ENSCABP00000011723
annotation not available
     
 0.627
APOA4
Apolipoprotein A4.
     
 0.626
APOM
Apolipoprotein M.
     
 0.626
TMEM192
Transmembrane protein 192.
     
 0.579
PCP4L1
Purkinje cell protein 4 like 1.
      
 0.551
APOA1
Apolipoprotein A1.
    
 0.524
ENSCABP00000028392
annotation not available
    
 0.524
ENSCABP00000007830
annotation not available
     
 0.520
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.