STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2F1General transcription factor IIF subunit 1. (506 aa)    
Predicted Functional Partners:
POLR2I
RNA polymerase II subunit I.
   
 0.999
POLR2B
RNA polymerase II subunit B.
   
 0.999
POLR2C
RNA polymerase II subunit C.
    
 0.998
GTF2B
General transcription factor IIB.
    
 0.998
POLR2G
RNA polymerase II subunit G.
   
 0.998
CTDP1
CTD phosphatase subunit 1.
   
 0.998
POLR2E
RNA polymerase II subunit E.
   
 0.996
GTF2E2
General transcription factor IIE subunit 2.
   
 0.996
GTF2H4
General transcription factor IIH subunit 4.
    
 0.995
GTF2A2
General transcription factor IIA subunit 2.
    
 0.995
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.