STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOR1ATorsin family 1 member A. (323 aa)    
Predicted Functional Partners:
TOR1AIP2
Torsin 1A interacting protein 2.
    
 0.838
COPS4
COP9 signalosome subunit 4.
   
  0.711
STON2
Stonin 2.
    
  0.707
COPS5
COP9 signalosome subunit 5.
     
 0.651
COPS2
COP9 signalosome subunit 2.
   
 
  0.651
COPS8
COP9 signalosome subunit 8.
   
 
  0.640
GTF2A1L
General transcription factor IIA subunit 1 like.
    
  0.566
TOR1AIP1
Torsin 1A interacting protein 1.
    
 0.523
C9orf78
Chromosome 9 open reading frame 78.
 
    
 0.425
ENSCABP00000028271
annotation not available
      
 0.406
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.