STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX41DEAD-box helicase 41. (617 aa)    
Predicted Functional Partners:
NKAP
NFKB activating protein.
    
  0.896
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.864
ENSCABP00000028271
annotation not available
    
   0.823
CDC40
Cell division cycle 40.
    
  0.789
ENSCABP00000013000
annotation not available
   
  0.774
ENSCABP00000031118
annotation not available
   
 0.743
DHX9
DExH-box helicase 9.
    
 0.740
DHX34
DExH-box helicase 34.
   
 0.732
DHX35
DEAH-box helicase 35.
   
 0.729
ENSCABP00000011436
annotation not available
   
 0.727
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.