STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000006597annotation not available (160 aa)    
Predicted Functional Partners:
SLC9A6
Solute carrier family 9 member A6.
    
 
0.832
SMC3
Structural maintenance of chromosomes 3.
    
 0.717
SLC8B1
Solute carrier family 8 member B1.
   
 
 0.528
RAD21
RAD21 cohesin complex component.
     
 0.509
ENSCABP00000023077
annotation not available
     
 0.509
SMC1B
Structural maintenance of chromosomes 1B.
    
  0.504
SMC1A
Structural maintenance of chromosomes 1A.
    
  0.504
TMCO3
Transmembrane and coiled-coil domains 3.
   
 
 0.497
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
     
 0.472
PSMC1
Proteasome 26S subunit, ATPase 1.
    
  0.449
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.