STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCK2Phosphoenolpyruvate carboxykinase 2, mitochondrial. (664 aa)    
Predicted Functional Partners:
PC
Pyruvate carboxylase.
  
 
 0.899
CS
Citrate synthase.
    
 0.894
ENSCABP00000008381
annotation not available
   
 
 0.888
ENSCABP00000031789
annotation not available
     
 0.878
MDH1
Malate dehydrogenase 1.
  
 
 0.863
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.861
SUCLG1
succinate-CoA ligase alpha subunit.
    
 0.860
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
     
 0.860
MDH2
Malate dehydrogenase 2.
  
 
 0.854
ACLY
ATP citrate lyase.
  
 
 0.853
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.