STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX51DEAD-box helicase 51. (650 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.929
WDR12
WD repeat domain 12.
   
 0.910
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.904
GTPBP4
GTP binding protein 4.
   
 0.896
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
  
 0.875
NSA2
NSA2 ribosome biogenesis factor.
   
 0.872
GNL2
G protein nucleolar 2.
  
 0.870
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.869
WDR74
WD repeat domain 74.
   
 0.865
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.861
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.