STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBGT1Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group). (331 aa)    
Predicted Functional Partners:
ENSCABP00000001325
annotation not available
    
 0.927
ENSCABP00000028776
annotation not available
    
 0.927
B3GALNT1
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group).
     
 0.823
B3GALT5
Beta-1,3-galactosyltransferase 5.
     
 0.775
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
     
 0.752
B3GALT1
Beta-1,3-galactosyltransferase 1.
     
 0.707
ENSCABP00000026063
annotation not available
     
 0.707
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.551
RADIL
Rap associating with DIL domain.
    
  0.531
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.528
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.