STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNPS1RNA binding protein with serine rich domain 1. (307 aa)    
Predicted Functional Partners:
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.999
SAP18
Sin3A associated protein 18.
   
 0.998
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.998
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.996
PNN
Pinin, desmosome associated protein.
   
 0.996
UPF1
UPF1 RNA helicase and ATPase.
    
 0.994
RBM8A
RNA binding motif protein 8A.
   
0.993
ENSCABP00000013000
annotation not available
   
 0.985
UBE2I
Ubiquitin conjugating enzyme E2 I.
   
   0.966
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.963
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.