STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000007124annotation not available (321 aa)    
Predicted Functional Partners:
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.931
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.857
ENSCABP00000030094
annotation not available
   
 0.857
ENSCABP00000018947
annotation not available
    
 0.832
SEMA4D
Semaphorin 4D.
    
 0.832
ENSCABP00000021794
annotation not available
    
 0.832
ENSCABP00000031581
annotation not available
   
 0.676
ENSCABP00000019943
annotation not available
    
 
 0.606
ENSCABP00000011298
annotation not available
    
  0.498
ENSCABP00000011301
annotation not available
    
  0.498
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.