STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP1ACharged multivesicular body protein 1A. (196 aa)    
Predicted Functional Partners:
ENSCABP00000006765
annotation not available
    
 0.999
ENSCABP00000008162
annotation not available
     
 0.999
ENSCABP00000008165
annotation not available
     
 0.999
CHMP2A
Charged multivesicular body protein 2A.
   
0.993
VTA1
Vesicle trafficking 1.
    
 0.992
ENSCABP00000000458
annotation not available
 
 
 0.990
CHMP5
Charged multivesicular body protein 5.
   
 0.990
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.980
CHMP4B
Charged multivesicular body protein 4B.
    
 0.978
CHMP4C
Charged multivesicular body protein 4C.
    
 0.971
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.