STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETF1Eukaryotic translation termination factor 1. (437 aa)    
Predicted Functional Partners:
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.998
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.997
GSPT1
G1 to S phase transition 1.
   
 0.994
ENSCABP00000004585
annotation not available
    
 
 0.978
RPSA
Ribosomal protein SA.
   
 0.970
ENSCABP00000009171
annotation not available
   
   0.960
ENSCABP00000019398
annotation not available
    
 
 0.958
RPL8
Ribosomal protein L8.
  
 0.948
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.943
RPS20
Ribosomal protein S20.
  
 0.937
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.