STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU3F3POU class 3 homeobox 3. (260 aa)    
Predicted Functional Partners:
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
  0.612
BSX
Brain specific homeobox.
    
 0.568
GTF2B
General transcription factor IIB.
    
 0.549
SALL1
Spalt like transcription factor 1.
    
 0.536
SALL4
Spalt like transcription factor 4.
    
 0.536
SALL3
Spalt like transcription factor 3.
    
 0.536
SOX9
SRY-box transcription factor 9.
    
 0.534
SOX10
SRY-box transcription factor 10.
    
 0.534
SOX8
SRY-box transcription factor 8.
    
 0.509
SALL2
Spalt like transcription factor 2.
    
 0.508
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.