STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNB1Ephrin B1. (336 aa)    
Predicted Functional Partners:
NCK2
NCK adaptor protein 2.
    
 0.937
EFNB2
Ephrin B2.
  
 
0.908
ENSCABP00000014550
annotation not available
   
 0.900
EPHB6
EPH receptor B6.
   
 0.882
ENSCABP00000015924
annotation not available
   
 0.882
EPHB3
EPH receptor B3.
   
 0.882
EPHB2
EPH receptor B2.
   
 0.882
EPHB1
EPH receptor B1.
   
 0.882
ENSCABP00000016402
annotation not available
    
 0.881
ENSCABP00000021356
annotation not available
    
 0.881
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.