STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000007903annotation not available (610 aa)    
Predicted Functional Partners:
ENSCABP00000020911
annotation not available
    
 0.595
ENSCABP00000029478
annotation not available
    
  0.564
ENSCABP00000006846
annotation not available
    
  0.518
ENSCABP00000018096
annotation not available
    
  0.518
DDX58
DExD/H-box helicase 58.
    
  0.507
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.497
ENSCABP00000027890
annotation not available
    
  0.492
ENSCABP00000019414
annotation not available
    
  0.477
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.467
DDX41
DEAD-box helicase 41.
    
  0.459
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.