STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A5Solute carrier family 39 member 5. (515 aa)    
Predicted Functional Partners:
SLC30A4
Solute carrier family 30 member 4.
   
 0.535
SLC30A7
Solute carrier family 30 member 7.
   
 0.498
SLC30A1
Solute carrier family 30 member 1.
   
 0.497
ENSCABP00000030886
annotation not available
  
  
 0.474
SLC39A2
Solute carrier family 39 member 2.
   
 0.473
SLC30A6
Solute carrier family 30 member 6.
   
 0.466
SDR39U1
Short chain dehydrogenase/reductase family 39U member 1.
  
    0.451
SLC30A10
Solute carrier family 30 member 10.
   
 0.433
SLC1A1
Solute carrier family 1 member 1.
  
 
 0.429
SLC30A8
Solute carrier family 30 member 8.
   
 0.406
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.