STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000025580annotation not available (69 aa)    
Predicted Functional Partners:
THOC5
THO complex 5.
   
 0.993
THOC3
THO complex 3.
   
 0.993
THOC6
THO complex 6.
    
 0.992
THOC2
THO complex 2.
   
 0.990
ENSCABP00000024050
annotation not available
    
 0.972
ENSCABP00000026372
annotation not available
    
 0.972
ZC3H13
Zinc finger CCCH-type containing 13.
   
 0.959
ENSCABP00000013000
annotation not available
   
 0.958
DDX39A
DExD-box helicase 39A.
   
 0.957
DDX39B
DExD-box helicase 39B.
   
 0.957
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.