STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDK3Pyruvate dehydrogenase kinase 3. (432 aa)    
Predicted Functional Partners:
DLAT
Dihydrolipoamide S-acetyltransferase.
    
 0.987
PDHB
Pyruvate dehydrogenase E1 beta subunit.
    
 0.969
ENSCABP00000002047
annotation not available
   
 0.950
DLD
Dihydrolipoamide dehydrogenase.
   
 0.939
PDHX
Pyruvate dehydrogenase complex component X.
    
 0.937
MAP3K4
Mitogen-activated protein kinase kinase kinase 4.
    
 0.910
ENSCABP00000011298
annotation not available
     
 0.802
ENSCABP00000011301
annotation not available
     
 0.802
TNR
Tenascin R.
     
 0.802
TNN
Tenascin N.
     
 0.802
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.