STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIJ23259.1Phthalate 4,5-dioxygenase reductase subunit. (319 aa)    
Predicted Functional Partners:
cypA-5
Cytochrome P450.
 
 0.752
nifU
NifU family SUF system FeS assembly protein.
  
 0.688
iscS
Cysteine desulfurase.
  
 0.674
fpr-2
Putative ferredoxin-NADP reductase.
   
 0.635
fpr-3
ferredoxin--NADP(+) reductase.
   
 0.635
fpr-4
ferredoxin--NADP+ reductase.
   
 0.635
stcD
2,4-dienoyl-CoA reductase (NADPH).
  
 0.598
stcD-2
NADH:flavin oxidoreductase/NADH oxidase.
  
 0.598
stcD-3
NADH:flavin oxidoreductase/NADH oxidase.
  
 0.598
betB-5
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.597
Your Current Organism:
Amycolatopsis methanolica
NCBI taxonomy Id: 1068978
Other names: A. methanolica 239, Amycolatopsis methanolica 239, Amycolatopsis methanolica IFO 15065, Amycolatopsis methanolica IMSNU 20055, Amycolatopsis methanolica KCTC 9411, Amycolatopsis methanolica NCIB 11946, Amycolatopsis methanolica NRRL B-24139, Amycolatopsis methanolica str. 239, Amycolatopsis methanolica strain 239
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