STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384315_03650Unannotated protein. (394 aa)    
Predicted Functional Partners:
GCA_000384315_03649
Unannotated protein.
 
     0.838
GCA_000384315_03648
Unannotated protein.
 
    0.764
GCA_000384315_03736
Unannotated protein.
  
     0.586
GCA_000384315_03643
Unannotated protein.
 
     0.580
GCA_000384315_04245
Unannotated protein.
  
     0.578
GCA_000384315_06652
Unannotated protein.
  
     0.538
GCA_000384315_01112
Unannotated protein.
 
    0.503
GCA_000384315_03644
Unannotated protein.
       0.499
GCA_000384315_03645
Unannotated protein.
       0.499
GCA_000384315_03646
Unannotated protein.
       0.499
Your Current Organism:
Amycolatopsis nigrescens
NCBI taxonomy Id: 1068980
Other names: A. nigrescens CSC17Ta-90, Amycolatopsis nigrescens CSC17Ta-90, Amycolatopsis nigrescens DSM 44992, Amycolatopsis nigrescens str. CSC17Ta-90, Amycolatopsis nigrescens strain CSC17Ta-90
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.