STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384135_00245Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_000384135_01861
Unannotated protein.
   
 0.975
GCA_000384135_00506
Unannotated protein.
   
 0.974
GCA_000384135_00533
Unannotated protein.
   
 0.965
GCA_000384135_00243
Unannotated protein.
  
  
 0.957
GCA_000384135_01860
Unannotated protein.
   
 0.957
GCA_000384135_00467
Unannotated protein.
   
 0.952
GCA_000384135_00244
Unannotated protein.
  
  
 0.931
GCA_000384135_00246
Unannotated protein.
  
  
 0.931
GCA_000384135_00121
Unannotated protein.
  
 
 0.907
GCA_000384135_00687
Unannotated protein.
 
 
 0.884
Your Current Organism:
Succinispira mobilis
NCBI taxonomy Id: 1069080
Other names: S. mobilis DSM 6222, Succinispira mobilis DSM 6222, Succinispira mobilis str. DSM 6222, Succinispira mobilis strain DSM 6222
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.