STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384135_00338Unannotated protein. (612 aa)    
Predicted Functional Partners:
GCA_000384135_00337
Unannotated protein.
 
     0.667
GCA_000384135_00626
Unannotated protein.
 
 
 0.620
GCA_000384135_00156
Unannotated protein.
 
 
 0.619
GCA_000384135_00148
Unannotated protein.
 
 
 0.613
GCA_000384135_00341
Unannotated protein.
 
     0.602
GCA_000384135_00143
Unannotated protein.
  
  
 0.573
GCA_000384135_00340
Unannotated protein.
 
     0.573
GCA_000384135_00085
Unannotated protein.
  
     0.561
GCA_000384135_01544
Unannotated protein.
  
   
 0.530
GCA_000384135_00189
Unannotated protein.
  
     0.475
Your Current Organism:
Succinispira mobilis
NCBI taxonomy Id: 1069080
Other names: S. mobilis DSM 6222, Succinispira mobilis DSM 6222, Succinispira mobilis str. DSM 6222, Succinispira mobilis strain DSM 6222
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.