STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSC35404.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.904
OSC35403.1
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.891
OSC36077.1
Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OSC35325.1
Cell division protein ZapE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OSC34518.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
SdhD
Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OSC33294.1
Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
SdhB
Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
OSC33255.1
Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
OSC35408.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.597
Your Current Organism:
Mycolicibacillus koreensis
NCBI taxonomy Id: 1069220
Other names: DSM 45576, KCTC 19819, M. koreensis, Mycobacterium koreense, Mycobacterium koreense Kim et al. 2012, Mycobacterium sp. 01-305, Mycolicibacillus koreensis (Kim et al. 2012) Gupta et al. 2018, strain 01-305
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