STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969705_02441Unannotated protein. (536 aa)    
Predicted Functional Partners:
GCA_000969705_04886
Unannotated protein.
   
   0.815
GCA_000969705_03279
Unannotated protein.
  
     0.610
GCA_000969705_04470
Unannotated protein.
  
     0.600
GCA_000969705_02442
Unannotated protein.
       0.530
GCA_000969705_04027
Unannotated protein.
  
     0.529
GCA_000969705_02439
Unannotated protein.
  
    0.509
GCA_000969705_04142
Unannotated protein.
  
   
 0.491
GCA_000969705_00196
Unannotated protein.
  
     0.475
GCA_000969705_02443
Unannotated protein.
       0.460
GCA_000969705_02438
Unannotated protein.
 
     0.458
Your Current Organism:
Nitriliruptor alkaliphilus
NCBI taxonomy Id: 1069448
Other names: N. alkaliphilus DSM 45188, Nitriliruptor alkaliphilus ANL-iso2, Nitriliruptor alkaliphilus DSM 45188, Nitriliruptor alkaliphilus str. DSM 45188, Nitriliruptor alkaliphilus strain DSM 45188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.