STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969705_04522Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_000969705_04524
Unannotated protein.
       0.680
GCA_000969705_04523
Unannotated protein.
       0.676
GCA_000969705_03004
Unannotated protein.
    
  0.638
GCA_000969705_01340
Unannotated protein.
 
     0.603
GCA_000969705_04525
Unannotated protein.
  
    0.573
GCA_000969705_01513
Unannotated protein.
 
     0.548
GCA_000969705_01341
Unannotated protein.
  
     0.535
GCA_000969705_00288
Unannotated protein.
  
     0.525
GCA_000969705_02611
Unannotated protein.
 
     0.513
GCA_000969705_00666
Unannotated protein.
    
  0.451
Your Current Organism:
Nitriliruptor alkaliphilus
NCBI taxonomy Id: 1069448
Other names: N. alkaliphilus DSM 45188, Nitriliruptor alkaliphilus ANL-iso2, Nitriliruptor alkaliphilus DSM 45188, Nitriliruptor alkaliphilus str. DSM 45188, Nitriliruptor alkaliphilus strain DSM 45188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.