STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969705_05178Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_000969705_02906
Unannotated protein.
   
    0.782
GCA_000969705_05179
Unannotated protein.
       0.746
GCA_000969705_01799
Unannotated protein.
   
    0.732
GCA_000969705_05181
Unannotated protein.
 
     0.647
GCA_000969705_01754
Unannotated protein.
  
     0.640
GCA_000969705_01749
Unannotated protein.
  
     0.625
GCA_000969705_01753
Unannotated protein.
  
     0.568
GCA_000969705_05180
Unannotated protein.
       0.563
GCA_000969705_01751
Unannotated protein.
  
     0.547
GCA_000969705_02195
Unannotated protein.
   
    0.538
Your Current Organism:
Nitriliruptor alkaliphilus
NCBI taxonomy Id: 1069448
Other names: N. alkaliphilus DSM 45188, Nitriliruptor alkaliphilus ANL-iso2, Nitriliruptor alkaliphilus DSM 45188, Nitriliruptor alkaliphilus str. DSM 45188, Nitriliruptor alkaliphilus strain DSM 45188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.