STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRC_14900Sulphatase family protein. (734 aa)    
Predicted Functional Partners:
LRC_07030
Sulfatase family protein.
  
 
 
0.906
LRC_08720
Tetratricopeptide repeat family protein.
 
    0.658
LRC_07650
Putative competence protein/transcription factor.
  
     0.618
LRC_09710
Conserved hypothetical protein; Belongs to the UPF0346 family.
  
     0.560
LRC_13920
Conserved hypothetical protein.
  
     0.547
ftsQ
Cell division protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
    0.481
LRC_12360
Conserved hypothetical protein.
 
     0.475
LRC_05080
Conserved hypothetical protein.
 
   
 0.474
ecsB
Protein ecsB.
  
     0.458
LRC_14890
Sugar transport.
       0.453
Your Current Organism:
Lactobacillus ruminis
NCBI taxonomy Id: 1069534
Other names: L. ruminis ATCC 27782, Lactobacillus ruminis ATCC 27782, Lactobacillus ruminis str. ATCC 27782, Lactobacillus ruminis strain ATCC 27782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.