STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliKFlagellar hook-length control protein, FliK. (465 aa)    
Predicted Functional Partners:
fliY
Flagellar motor switch protein.
  
  
 0.999
flgD
Flagellar basal body rod modification protein.
  
 
 0.989
fliG
Flagellar motor switch protein, FliG.
  
  
 0.982
fliI
Flagellum specific ATP synthase.
  
  
 0.981
fliF
Flagellar M-ring protein, FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.980
fliJ
Flagellar export protein, FliJ.
  
  
 0.979
flgE
Flagellar hook protein, FlgE.
  
 
 0.976
fliH
Flagellar assembly protein, FliH.
  
  
 0.975
fliL
Flagellar biosynthesis protein, FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.972
fliE
Flagellar hook-basal body complex protein, FliE.
  
  
 0.964
Your Current Organism:
Lactobacillus ruminis
NCBI taxonomy Id: 1069534
Other names: L. ruminis ATCC 27782, Lactobacillus ruminis ATCC 27782, Lactobacillus ruminis str. ATCC 27782, Lactobacillus ruminis strain ATCC 27782
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