STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motBFlagellar motor protein, MotB. (267 aa)    
Predicted Functional Partners:
motA
Flagellar motor protein, MotA.
 
  
 0.988
fliG
Flagellar motor switch protein, FliG.
  
 
 0.827
flgE
Flagellar hook protein, FlgE.
  
 
 0.745
fliM
Flagellar motor switch protein.
 
  
 0.730
fliY
Flagellar motor switch protein.
 
  
 0.694
flgC
Flagellar basal-body rod protein, FlgC; Belongs to the flagella basal body rod proteins family.
  
 
 0.660
flgK
Flagellar hook associated protein.
  
  
 0.650
flgF
Flagellar basal-body rod protein.
  
 
 0.629
fliF
Flagellar M-ring protein, FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.615
LRC_10130
Hypothetical protein.
  
  
 0.611
Your Current Organism:
Lactobacillus ruminis
NCBI taxonomy Id: 1069534
Other names: L. ruminis ATCC 27782, Lactobacillus ruminis ATCC 27782, Lactobacillus ruminis str. ATCC 27782, Lactobacillus ruminis strain ATCC 27782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.