STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRC_17390ABC transporter permease. (227 aa)    
Predicted Functional Partners:
LRC_17370
ABC transporter substrate binding component.
 
 
 0.899
LRC_10650
ABC transporter, ATP-binding protein.
 
 0.837
LRC_17190
ABC transporter, ATP-binding protein.
 
 0.829
LRC_18680
Glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein.
 
 
 0.828
LRC_17210
ABC transporter substrate-binding component.
 
 
 0.821
LRC_13790
ABC superfamily ATP binding cassette transporter.
 
 0.815
LRC_13090
Polar amino acid ABC transporter ATP-binding protein.
 
 0.801
LRC_13800
Glutamate ABC superfamily ATP binding cassette transporter, membrane protein.
  
0.735
LRC_18670
Glutamate ABC superfamily ATP binding cassette transporter permease protein.
0.671
LRC_13080
Polar amino acid ABC transporter substrate-binding protein.
 
 
 0.595
Your Current Organism:
Lactobacillus ruminis
NCBI taxonomy Id: 1069534
Other names: L. ruminis ATCC 27782, Lactobacillus ruminis ATCC 27782, Lactobacillus ruminis str. ATCC 27782, Lactobacillus ruminis strain ATCC 27782
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