STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRC_19220ABC transporter ATP-binding and permease protein. (586 aa)    
Predicted Functional Partners:
LRC_19230
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
0.989
pstB-2
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
metN-2
ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.899
LRC_17190
ABC transporter, ATP-binding protein.
 
     
0.899
LRC_03260
Multidrug resistance ABC transporter ATP-binding and permease protein.
 
  
0.587
ftsE
Cell-division associated ABC transporter, ATP binding FtsE subunit; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.574
opp-3
Oligopeptide transport ATP-binding protein.
     
0.568
LRC_19240
Transcriptional regulator.
  
    0.535
LRC_17080
Putative bacteriocin ABC transporter ATP binding protein.
 
 
0.407
Your Current Organism:
Lactobacillus ruminis
NCBI taxonomy Id: 1069534
Other names: L. ruminis ATCC 27782, Lactobacillus ruminis ATCC 27782, Lactobacillus ruminis str. ATCC 27782, Lactobacillus ruminis strain ATCC 27782
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