STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_04003Msg2_C domain-containing protein. (1150 aa)    
Predicted Functional Partners:
PNEG_02871
Uncharacterized protein.
   
 0.955
PNEG_01109
GATA-type domain-containing protein.
    
 0.952
PNEG_02409
Uncharacterized protein.
   
 0.934
PNEG_02195
SWIB domain-containing protein.
    
 0.931
PNEG_01775
Uncharacterized protein.
    
 0.871
PNEG_02344
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.871
PNEG_01298
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.835
PNEG_01047
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.
    
 0.835
PNEG_01006
Uncharacterized protein.
    
 0.835
PNEG_01170
Histone H3-like centromeric protein cnp1.
    
 0.773
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.