STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02758Uncharacterized protein. (389 aa)    
Predicted Functional Partners:
PNEG_02895
Centromere/microtubule-binding protein CBF5.
   
 
 0.936
PNEG_01673
Uncharacterized protein.
    
 
 0.883
PNEG_02355
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.835
PNEG_02447
GIT1_C domain-containing protein.
  
 
 0.715
PNEG_03044
Aspartate aminotransferase.
  
 0.654
PNEG_01707
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.648
PNEG_01094
Sod_Fe_C domain-containing protein.
  
 
 0.648
PNEG_02322
Uncharacterized protein.
    
 0.646
PNEG_01856
PINc domain-containing protein.
    
 0.646
PNEG_01156
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.646
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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