Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PNEG_00814 | PNEG_00909 | M7PBG7 | M7PAA4 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.711 |
| PNEG_00814 | PNEG_01320 | M7PBG7 | M7NTK7 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | Bms1-type G domain-containing protein. | 0.993 |
| PNEG_00814 | PNEG_01476 | M7PBG7 | M7NND3 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.993 |
| PNEG_00814 | PNEG_01682 | M7PBG7 | M7NML8 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.711 |
| PNEG_00814 | PNEG_01683 | M7PBG7 | M7PHJ1 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.711 |
| PNEG_00814 | PNEG_02183 | M7PBG7 | M7PGL1 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.998 |
| PNEG_00814 | PNEG_02343 | M7PBG7 | M7NL59 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.881 |
| PNEG_00814 | PNEG_03145 | M7PBG7 | M7NM79 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.926 |
| PNEG_00814 | PNEG_03364 | M7PBG7 | M7NI06 | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | rRNA 2'-O-methyltransferase fibrillarin. | 0.914 |
| PNEG_00909 | PNEG_00814 | M7PAA4 | M7PBG7 | Uncharacterized protein; Belongs to the DEAD box helicase family. | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.711 |
| PNEG_00909 | PNEG_01320 | M7PAA4 | M7NTK7 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Bms1-type G domain-containing protein. | 0.628 |
| PNEG_00909 | PNEG_01476 | M7PAA4 | M7NND3 | Uncharacterized protein; Belongs to the DEAD box helicase family. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.474 |
| PNEG_00909 | PNEG_02183 | M7PAA4 | M7PGL1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.784 |
| PNEG_00909 | PNEG_02343 | M7PAA4 | M7NL59 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.834 |
| PNEG_00909 | PNEG_02344 | M7PAA4 | M7PG14 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.724 |
| PNEG_00909 | PNEG_03145 | M7PAA4 | M7NM79 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.682 |
| PNEG_00909 | PNEG_03364 | M7PAA4 | M7NI06 | Uncharacterized protein; Belongs to the DEAD box helicase family. | rRNA 2'-O-methyltransferase fibrillarin. | 0.893 |
| PNEG_01320 | PNEG_00814 | M7NTK7 | M7PBG7 | Bms1-type G domain-containing protein. | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.993 |
| PNEG_01320 | PNEG_00909 | M7NTK7 | M7PAA4 | Bms1-type G domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.628 |
| PNEG_01320 | PNEG_01476 | M7NTK7 | M7NND3 | Bms1-type G domain-containing protein. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.999 |
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