PNEG_02065 protein (Pneumocystis murina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PNEG_02065

Uncharacterized protein. (559 aa)

Predicted Functional Partners:

PNEG_02935

0.895

PNEG_00456

0.879

PNEG_03420

0.868

PNEG_00535

0.851

PNEG_02409

0.845

PNEG_02005

0.843

PNEG_00174

0.836

PNEG_00178

0.836

PNEG_02095

0.828

PNEG_01772

0.823

Your Current Organism:

Pneumocystis murina

NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PNEG_00174	PNEG_00178	M7PCW5	M7PMQ4	Vezatin domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.437
PNEG_00174	PNEG_00456	M7PCW5	M7NWC1	Vezatin domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.844
PNEG_00174	PNEG_02065	M7PCW5	M7NLD5	Vezatin domain-containing protein.	Uncharacterized protein.	0.836
PNEG_00174	PNEG_02095	M7PCW5	M7NQG2	Vezatin domain-containing protein.	Ubiquitin-like protein pmt3/smt3.	0.964
PNEG_00174	PNEG_02935	M7PCW5	M7P4N0	Vezatin domain-containing protein.	DNA repair protein rad18.	0.966
PNEG_00174	PNEG_03420	M7PCW5	M7NI79	Vezatin domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.833
PNEG_00178	PNEG_00174	M7PMQ4	M7PCW5	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Vezatin domain-containing protein.	0.437
PNEG_00178	PNEG_00456	M7PMQ4	M7NWC1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.844
PNEG_00178	PNEG_02065	M7PMQ4	M7NLD5	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.836
PNEG_00178	PNEG_02095	M7PMQ4	M7NQG2	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ubiquitin-like protein pmt3/smt3.	0.964
PNEG_00178	PNEG_02935	M7PMQ4	M7P4N0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA repair protein rad18.	0.970
PNEG_00178	PNEG_03420	M7PMQ4	M7NI79	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.833
PNEG_00456	PNEG_00174	M7NWC1	M7PCW5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Vezatin domain-containing protein.	0.844
PNEG_00456	PNEG_00178	M7NWC1	M7PMQ4	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.844
PNEG_00456	PNEG_02065	M7NWC1	M7NLD5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.879
PNEG_00456	PNEG_02095	M7NWC1	M7NQG2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like protein pmt3/smt3.	0.898
PNEG_00456	PNEG_02935	M7NWC1	M7P4N0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	DNA repair protein rad18.	0.935
PNEG_00456	PNEG_03420	M7NWC1	M7NI79	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.999
PNEG_00535	PNEG_02005	M7PM27	M7PHA4	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein; Belongs to the actin family.	0.996
PNEG_00535	PNEG_02065	M7PM27	M7NLD5	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.851