STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02114Nefa_Nip30_N domain-containing protein. (236 aa)    
Predicted Functional Partners:
PNEG_02296
PA28_beta domain-containing protein.
    
 
 0.838
PNEG_03064
Pre-mRNA-processing-splicing factor 8.
    
   0.830
PNEG_02751
Uncharacterized protein.
    
   0.830
PNEG_02209
Suf domain-containing protein.
    
   0.830
PNEG_03068
RRM domain-containing protein.
   
   0.572
PNEG_00629
Uncharacterized protein.
    
 
 0.565
PNEG_01481
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
   
 
 0.564
PNEG_01845
Uncharacterized protein.
   
   0.563
PNEG_01495
Uncharacterized protein.
    
 
 0.562
PNEG_00468
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.560
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.