STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02207J domain-containing protein. (208 aa)    
Predicted Functional Partners:
PNEG_02919
PAPS_reduct domain-containing protein.
 
      0.839
PNEG_01344
Cwf21 domain-containing protein.
    
 0.683
PNEG_02266
Uncharacterized protein.
   
 0.674
PNEG_02827
C2H2-type domain-containing protein.
   
 
  0.673
PNEG_03570
Uncharacterized protein.
   
 
  0.640
PNEG_02248
RRM domain-containing protein.
     
 0.623
PNEG_00909
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
  0.621
PNEG_00308
V-type ATPase, C subunit; Belongs to the V-ATPase proteolipid subunit family.
 
      0.621
PNEG_03428
Matrin-type domain-containing protein.
    
   0.601
PNEG_00367
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 
      0.579
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.