STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02939SEC7 domain-containing protein. (1481 aa)    
Predicted Functional Partners:
PNEG_02573
GTP-binding protein ypt1.
    
 0.977
PNEG_01119
ADP-ribosylation factor 1-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.936
PNEG_00154
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.929
PNEG_00842
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.922
PNEG_00037
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.915
PNEG_02192
Uso1_p115_head domain-containing protein.
   
 0.890
PNEG_04310
SEC7 domain-containing protein.
   
 
0.884
PNEG_01174
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.874
PNEG_03223
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
   
 0.842
PNEG_01920
Uncharacterized protein.
    
 0.838
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.