STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02889Serine-tRNA ligase. (449 aa)    
Predicted Functional Partners:
PNEG_00985
Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.935
PNEG_02034
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
  
 0.919
PNEG_01371
Serine-tRNA ligase.
  
  
 
0.906
PNEG_02223
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.904
PNEG_02420
Uncharacterized protein.
    
 
 0.893
PNEG_00042
SGF29 C-terminal domain-containing protein.
    
 
 0.882
PNEG_00620
GTP-binding protein rhb1.
 
    
 0.880
PNEG_01051
Uncharacterized protein.
    
 
 0.877
PNEG_00780
Uncharacterized protein.
    
 
 0.875
PNEG_03247
TFIID_20kDa domain-containing protein.
    
 
 0.874
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.