STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_01620WD_REPEATS_REGION domain-containing protein. (421 aa)    
Predicted Functional Partners:
PNEG_01020
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.999
PNEG_00277
CPSF_A domain-containing protein.
    
 0.999
PNEG_01300
E3 ubiquitin-protein ligase RBX1.
    
 0.992
PNEG_01836
CDT1_C domain-containing protein.
   
 
 0.989
PNEG_00174
Vezatin domain-containing protein.
   
 0.961
PNEG_00178
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.961
PNEG_01086
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
  
 0.922
PNEG_01940
WD_REPEATS_REGION domain-containing protein.
   
  
 0.920
PNEG_02815
Uncharacterized protein.
   
  
 0.884
PNEG_03253
Uncharacterized protein.
   
 
 0.863
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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