STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02735TPR_REGION domain-containing protein. (235 aa)    
Predicted Functional Partners:
PNEG_00793
Uncharacterized protein.
   
    0.555
PNEG_01468
Uncharacterized protein.
   
  
 0.470
PNEG_02238
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
 
      0.450
PNEG_02162
MSP domain-containing protein.
    
 
 0.442
PNEG_01977
HD_domain domain-containing protein.
 
 
    0.434
PNEG_01887
Uncharacterized protein.
      
0.418
PNEG_02621
Uncharacterized protein.
    
 
 0.418
PNEG_03182
Uncharacterized protein.
      
 0.416
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.