STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02772UBA domain-containing protein. (320 aa)    
Predicted Functional Partners:
PNEG_01699
Polyubiquitin.
   
 
 0.952
PNEG_00166
Rab-GAP TBC domain-containing protein.
    
 
 0.941
PNEG_03366
UV excision repair protein Rad23.
   
 
 0.924
PNEG_02980
Ubiquitin-40S ribosomal protein S27a.
   
 
 0.899
PNEG_01656
Uncharacterized protein.
   
 
 0.869
PNEG_02822
VWFA domain-containing protein.
   
 
 0.797
PNEG_03488
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.735
PNEG_02762
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.730
PNEG_01657
Uncharacterized protein.
   
 
 0.707
PNEG_02377
Mitochondrial intermediate peptidase.
      
 0.699
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.