PNEG_02601 protein (Pneumocystis murina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PNEG_02601

PIG-P domain-containing protein. (216 aa)

Predicted Functional Partners:

PNEG_02268

0.977

PNEG_01368

0.967

PNEG_00361

0.966

PNEG_00231

0.961

PNEG_00507

0.961

PNEG_01011

0.949

PNEG_00413

0.876

PNEG_02334

0.789

PNEG_01404

0.789

PNEG_00766

0.789

Your Current Organism:

Pneumocystis murina

NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PNEG_00231	PNEG_00361	M7PD50	M7NVL4	Uncharacterized protein.	Uncharacterized protein.	0.961
PNEG_00231	PNEG_00507	M7PD50	M7PM00	Uncharacterized protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.959
PNEG_00231	PNEG_00766	M7PD50	M7NV52	Uncharacterized protein.	Uncharacterized protein.	0.783
PNEG_00231	PNEG_01011	M7PD50	M7PAJ1	Uncharacterized protein.	Uncharacterized protein.	0.949
PNEG_00231	PNEG_01368	M7PD50	M7NPN4	Uncharacterized protein.	Uncharacterized protein.	0.962
PNEG_00231	PNEG_01404	M7PD50	M7NSM6	Uncharacterized protein.	Uncharacterized protein.	0.783
PNEG_00231	PNEG_02268	M7PD50	M7NKY6	Uncharacterized protein.	Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit.	0.969
PNEG_00231	PNEG_02334	M7PD50	M7NL51	Uncharacterized protein.	Glycos_transf_1 domain-containing protein.	0.783
PNEG_00231	PNEG_02601	M7PD50	M7NPU8	Uncharacterized protein.	PIG-P domain-containing protein.	0.961
PNEG_00361	PNEG_00231	M7NVL4	M7PD50	Uncharacterized protein.	Uncharacterized protein.	0.961
PNEG_00361	PNEG_00507	M7NVL4	M7PM00	Uncharacterized protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.971
PNEG_00361	PNEG_00766	M7NVL4	M7NV52	Uncharacterized protein.	Uncharacterized protein.	0.793
PNEG_00361	PNEG_01011	M7NVL4	M7PAJ1	Uncharacterized protein.	Uncharacterized protein.	0.949
PNEG_00361	PNEG_01368	M7NVL4	M7NPN4	Uncharacterized protein.	Uncharacterized protein.	0.997
PNEG_00361	PNEG_01404	M7NVL4	M7NSM6	Uncharacterized protein.	Uncharacterized protein.	0.797
PNEG_00361	PNEG_02268	M7NVL4	M7NKY6	Uncharacterized protein.	Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit.	0.978
PNEG_00361	PNEG_02334	M7NVL4	M7NL51	Uncharacterized protein.	Glycos_transf_1 domain-containing protein.	0.793
PNEG_00361	PNEG_02601	M7NVL4	M7NPU8	Uncharacterized protein.	PIG-P domain-containing protein.	0.966
PNEG_00413	PNEG_02601	M7PLQ6	M7NPU8	Vps8 domain-containing protein.	PIG-P domain-containing protein.	0.876
PNEG_00507	PNEG_00231	M7PM00	M7PD50	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	Uncharacterized protein.	0.959