STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNEG_02600MINDY_DUB domain-containing protein. (430 aa)    
Predicted Functional Partners:
PNEG_01699
Polyubiquitin.
    
 
 0.864
PNEG_00246
Ribosomal lysine N-methyltransferase 4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that monomethylates 60S ribosomal protein L42. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily.
    
 0.827
PNEG_02980
Ubiquitin-40S ribosomal protein S27a.
    
   0.804
PNEG_03597
Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.778
PNEG_01454
COesterase domain-containing protein; Belongs to the type-B carboxylesterase/lipase family.
     
 0.769
PNEG_02256
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
     
 0.761
PNEG_00616
Uncharacterized protein.
    
   0.746
PNEG_01906
Ubiquitin-60S ribosomal protein L40.
    
   0.746
PNEG_00977
RING-type domain-containing protein.
    
 0.621
PNEG_00370
RING-type domain-containing protein.
    
 0.621
Your Current Organism:
Pneumocystis murina
NCBI taxonomy Id: 1069680
Other names: P. murina B123, Pneumocystis murina B123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.